CVRG User Guides

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CVRG User Guides Listing 

The CVRG has integrated a number of open source software products and developed a number of tools internally. To assist our community in using these tools we have compiled a list of video demonstrations/user guides for each of the tools within the CVRG.
These are:

  • OpenClinica
  • CVRG ECG Gadget
  • Seg3D
  • Large Diffeomorphic Metric Mapping (LDDMM)


OpenClinica has a User Resources webpage dedicated to instructing users in how to use OpenClinica. Within that page, there is a 33-minute video demonstration as well as tutorial videos on using the system.

CVRG ECGrid Toolkit

The CVRG ECGrid Toolkit has a demonstration video and a step-by-step guide available.

CVRG Imaging Workflow

Click here for a guide to storing images using CVRG resources.

CVRG Imaging Digitization Workflow

Click here for a step-by-step guide to digitizing images using various open source resources.


RSNA MIRC has a Clinical Trial Administrator's guide available.


Seg3D has a User Documentation section on its website. The CVRG team has developed a step-by-step guide to segmenting images with Seg3D, which has been cited by the Seg3D documentation.

Large Diffeomorphic Metric Mapping (LDDMM)

LDDMM has a set of tutorials available under the LDDMM Suite heading. A majority of the work within the CVRG involves lddmm-volume. A direct link to that tutorial is here.

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